Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Pyrogenes; x__Leptospira interrogans serovar Pyrogenes str. Sri Lanka 14
NCBI Strain Identifiers Sri Lanka 14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 242
N50 Contigs 36,765 bp
Longest Contig 133,397 bp
Scaffold Count 242
N50 Scaffolds 36,765 bp
Longest Scaffold 133,397 bp
Genome Size 4,830,118 bp
Protein Count 4,056
Coding Density 75.47%
GC Percentage 34.98%
Ambiguous Bases N/A
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CA_glsol064
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01919809
Country None
Date 2013-03-01
Genbank Assembly Accession GCA_000342805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,414
Refseq Category na
Seq Rel Date 2013/03/01
Spanned Gaps 0
Species Taxid 173
SSU Count 3
Submitter J. Craig Venter Institute
Taxid 1291358
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOWI00000000.1