Streptococcus mutans
Isolate HQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans; x__Streptococcus mutans SM1
NCBI Strain Identifiers SM1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006739205.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.01%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 3
tRNA Count 13
Contig Count 114
N50 Contigs 42,737 bp
Longest Contig 111,405 bp
Scaffold Count 114
N50 Scaffolds 42,737 bp
Longest Scaffold 111,405 bp
Genome Size 1,994,929 bp
Protein Count 1,907
Coding Density 86.83%
GC Percentage 36.75%
Ambiguous Bases N/A
GTDB representative GCA_006739205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33957v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02428981
Country China: Hong Kong
Date 2013-02-11
Genbank Assembly Accession GCA_000339575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 1,970
Refseq Category na
Seq Rel Date 2013/02/11
Spanned Gaps 0
Species Taxid 1309
SSU Count 1
Submitter Cornell University
Taxid 857108
Total Gap Length 0
Translation Table 11
tRNA Count (total) 27
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHTD00000000.1