Streptococcus mutans
Isolate HQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans; x__Streptococcus mutans SF14
NCBI Strain Identifiers SF14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006739205.1)
Genome Characteristics
CheckM Completeness 98.88%
CheckM Contamination 0.82%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 13
Contig Count 97
N50 Contigs 62,237 bp
Longest Contig 199,671 bp
Scaffold Count 97
N50 Scaffolds 62,237 bp
Longest Scaffold 199,671 bp
Genome Size 1,944,789 bp
Protein Count 1,868
Coding Density 86.91%
GC Percentage 36.79%
Ambiguous Bases N/A
GTDB representative GCA_006739205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33943v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02429031
Country USA
Date 2013-02-11
Genbank Assembly Accession GCA_000339435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 1,926
Refseq Category na
Seq Rel Date 2013/02/11
Spanned Gaps 0
Species Taxid 1309
SSU Count 1
Submitter Cornell University
Taxid 857120
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHSQ00000000.1