Streptococcus mutans
Isolate HQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans; x__Streptococcus mutans 4VF1
NCBI Strain Identifiers 4VF1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006739205.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.77%
CheckM Strain Heterogeneity 16.67
5S Count 1
16S Count 1
23S Count 1
tRNA Count 13
Contig Count 127
N50 Contigs 34,502 bp
Longest Contig 103,013 bp
Scaffold Count 127
N50 Scaffolds 34,502 bp
Longest Scaffold 103,013 bp
Genome Size 2,008,731 bp
Protein Count 1,880
Coding Density 87.12%
GC Percentage 36.63%
Ambiguous Bases N/A
GTDB representative GCA_006739205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33921v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02429085
Country Brazil
Date 2013-02-11
Genbank Assembly Accession GCA_000339215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 1,937
Refseq Category na
Seq Rel Date 2013/02/11
Spanned Gaps 0
Species Taxid 1309
SSU Count 1
Submitter Cornell University
Taxid 857146
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHRQ00000000.1