Haloferax denitrificans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Halobacteria; o__Halobacteriales; f__Haloferacaceae; g__Haloferax; s__Haloferax denitrificans
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Halobacteria; o__Haloferacales; f__Haloferacaceae; g__Haloferax; s__Haloferax denitrificans
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Halobacteria; o__Haloferacales; f__Haloferacaceae; g__Haloferax; s__Haloferax denitrificans; x__Haloferax denitrificans ATCC 35960
NCBI Strain Identifiers ATCC 35960
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 21
N50 Contigs 367,032 bp
Longest Contig 473,491 bp
Scaffold Count 21
N50 Scaffolds 367,032 bp
Longest Scaffold 473,491 bp
Genome Size 3,825,973 bp
Protein Count 3,809
Coding Density 86.06%
GC Percentage 66.29%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33779v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471644
Country None
Date 2013-02-04
Genbank Assembly Accession GCA_000337795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,747
Refseq Category na
Seq Rel Date 2013/02/04
Spanned Gaps 0
Species Taxid 35745
SSU Count 1
Submitter University of California, Davis
Taxid 662478
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AOLP00000000.1