Natrinema pallidum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacterota; c__Halobacteria; o__Halobacteriales; f__Natrialbaceae; g__Natrinema; s__Natrinema pallidum
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Halobacteria; o__Natrialbales; f__Natrialbaceae; g__Natrinema; s__Natrinema pallidum
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Halobacteria; o__Natrialbales; f__Natrialbaceae; g__Natrinema; s__Natrinema pallidum; x__Natrinema pallidum DSM 3751
NCBI Strain Identifiers DSM 3751
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 98.1%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 115
N50 Contigs 88,597 bp
Longest Contig 242,663 bp
Scaffold Count 115
N50 Scaffolds 88,603 bp
Longest Scaffold 242,669 bp
Genome Size 3,915,814 bp
Protein Count 3,969
Coding Density 83.27%
GC Percentage 63.72%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33761v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471671
Country None
Date 2013-2-4
Genbank Assembly Accession GCA_000337615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 3,852
Refseq Category na
Seq Rel Date 2013/02/04
Spanned Gaps 0
Species Taxid 69527
SSU Count 3
Submitter University of California, Davis
Taxid 1227495
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AOII00000000.1