Halorubrum tebenquichense
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Halobacteria; o__Halobacteriales; f__Haloferacaceae; g__Halorubrum; s__Halorubrum tebenquichense
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Halobacteria; o__Haloferacales; f__Halorubraceae; g__Halorubrum; s__Halorubrum tebenquichense
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Halobacteria; o__Haloferacales; f__Halorubraceae; g__Halorubrum; s__Halorubrum tebenquichense; x__Halorubrum tebenquichense DSM 14210
NCBI Strain Identifiers DSM 14210
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.76%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 93
N50 Contigs 75,545 bp
Longest Contig 242,361 bp
Scaffold Count 93
N50 Scaffolds 75,545 bp
Longest Scaffold 242,361 bp
Genome Size 3,328,860 bp
Protein Count 3,354
Coding Density 85.44%
GC Percentage 68.03%
Ambiguous Bases 89
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33741v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471631
Country None
Date 2013-02-04
Genbank Assembly Accession GCA_000337415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,242
Refseq Category representative genome
Seq Rel Date 2013/02/04
Spanned Gaps 0
Species Taxid 119434
SSU Count 1
Submitter University of California, Davis
Taxid 1227485
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AOJD00000000.1