Escherichia dysenteriae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli 99.0816
NCBI Strain Identifiers 99.0816
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 3
23S Count 5
tRNA Count 18
Contig Count 225
N50 Contigs 67,476 bp
Longest Contig 203,207 bp
Scaffold Count 225
N50 Scaffolds 67,476 bp
Longest Scaffold 203,207 bp
Genome Size 5,194,961 bp
Protein Count 5,010
Coding Density 87.44%
GC Percentage 50.34%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33499v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01112507
Country Argentina
Date 2013-1-31
Genbank Assembly Accession GCA_000334995.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,480
Refseq Category na
Seq Rel Date 2013/01/31
Spanned Gaps 0
Species Taxid 562
SSU Count 3
Submitter Institute for Genome Sciences
Taxid 1005430
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOEA00000000.1