Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae; x__Streptococcus pneumoniae PNI0360
NCBI Strain Identifiers PNI0360
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 157
N50 Contigs 28,310 bp
Longest Contig 140,594 bp
Scaffold Count 157
N50 Scaffolds 28,310 bp
Longest Scaffold 140,594 bp
Genome Size 2,047,040 bp
Protein Count 2,130
Coding Density 86.00%
GC Percentage 39.73%
Ambiguous Bases N/A
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM33481v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299532
Country None
Date 2013-1-31
Genbank Assembly Accession GCA_000334815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,306
Refseq Category na
Seq Rel Date 2013/01/31
Spanned Gaps 0
Species Taxid 1313
SSU Count 2
Submitter Washington University
Taxid 1159100
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKRJ00000000.1