Clostridium saccharoperbutylacetonicum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium saccharoperbutylacetonicum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium saccharoperbutylacetonicum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium saccharoperbutylacetonicum; x__Clostridium saccharoperbutylacetonicum N1-4; x__Clostridium saccharoperbutylacetonicum N1-4(HMT)
NCBI Strain Identifiers ATCC 27021
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000340885.1)
Genome Characteristics
CheckM Completeness 98.39%
CheckM Contamination 1.69%
CheckM Strain Heterogeneity 0.0
5S Count 13
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 210
N50 Contigs 78,354 bp
Longest Contig 239,576 bp
Scaffold Count 210
N50 Scaffolds 78,354 bp
Longest Scaffold 239,576 bp
Genome Size 6,569,628 bp
Protein Count 5,954
Coding Density 83.45%
GC Percentage 29.43%
Ambiguous Bases 2
GTDB representative GCA_000340885.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CloSac1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469458
Country None
Date 2013-01-30
Genbank Assembly Accession GCA_000334435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,795
Refseq Category na
Seq Rel Date 2013/01/30
Spanned Gaps 0
Species Taxid 36745
SSU Count 4
Submitter CIB-CSIC
Taxid 931276
Total Gap Length 0
Translation Table 11
tRNA Count (total) 63
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AOIF00000000.1