Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii CAIM 519 = NBRC 15631
NCBI Strain Identifiers CAIM 519
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 213
N50 Contigs 46,294 bp
Longest Contig 173,221 bp
Scaffold Count 213
N50 Scaffolds 46,294 bp
Longest Scaffold 173,221 bp
Genome Size 5,076,254 bp
Protein Count 4,793
Coding Density 85.12%
GC Percentage 45.04%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Vc-CAIM519
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469609
Country USA: Hawaii
Date 2013-1-29
Genbank Assembly Accession GCA_000334195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source seawater
Latitude Longitude None
Molecule Count 0
Protein Count 4,913
Refseq Category na
Seq Rel Date 2013/01/29
Spanned Gaps 0
Species Taxid 680
SSU Count 1
Submitter CIAD, A.C.
Taxid 1224742
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMDG00000000.1