Bacillus_B oryziterrae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_J; g__Bacillus_B; s__Bacillus_B oryziterrae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus oryziterrae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus oryziterrae
NCBI Strain Identifiers ZYK
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.68%
CheckM Contamination 0.88%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 3
tRNA Count 20
Contig Count 19
N50 Contigs 649,313 bp
Longest Contig 1,742,560 bp
Scaffold Count 18
N50 Scaffolds 1,902,401 bp
Longest Scaffold 1,902,401 bp
Genome Size 3,575,797 bp
Protein Count 3,381
Coding Density 84.21%
GC Percentage 36.10%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM33157v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471015
Country China: Yunnan
Date 2013-01-15
Genbank Assembly Accession GCA_000331575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source paddy soil
Latitude Longitude None
Molecule Count N/A
CDS Count 3,342
Refseq Category representative genome
Seq Rel Date 2013/01/15
Spanned Gaps 1
Species Taxid 1191699
SSU Count 2
Submitter State Key Lab of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, P. R. China
Taxid 1191699
Total Gap Length 694
Translation Table 11
tRNA Count (total) 63
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master ANOK00000000.1