Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Agona; x__Salmonella enterica subsp. enterica serovar Agona str. SH10GFN094
NCBI Strain Identifiers SH10GFN094
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 4
23S Count 5
tRNA Count 18
Contig Count 66
N50 Contigs 197,357 bp
Longest Contig 581,913 bp
Scaffold Count 66
N50 Scaffolds 197,357 bp
Longest Scaffold 581,913 bp
Genome Size 4,811,275 bp
Protein Count 4,524
Coding Density 87.42%
GC Percentage 52.02%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33064v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02415260
Country China: Shanghai
Date 2013-01-02
Genbank Assembly Accession GCA_000330645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source clinical
Latitude Longitude None
Molecule Count N/A
CDS Count 4,852
Refseq Category na
Seq Rel Date 2013/01/02
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter University of Maryland, College Park
Taxid 1262654
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANOU00000000.1