Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis; x__Salmonella enterica subsp. enterica serovar Enteritidis str. 648899 3-17
NCBI Strain Identifiers 648899 3-17
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.64%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 50.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 193
N50 Contigs 72,032 bp
Longest Contig 211,593 bp
Scaffold Count 193
N50 Scaffolds 72,032 bp
Longest Scaffold 211,593 bp
Genome Size 4,685,865 bp
Protein Count 4,550
Coding Density 87.16%
GC Percentage 52.10%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33016v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01041128
Country USA:OH
Date 2012-12-31
Genbank Assembly Accession GCA_000330165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source environmental swab
Latitude Longitude None
Molecule Count N/A
CDS Count 4,816
Refseq Category na
Seq Rel Date 2012/12/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 984221
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALHK00000000.1