Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis; x__Salmonella enterica subsp. enterica serovar Enteritidis str. CHS4
NCBI Strain Identifiers CHS4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.35%
CheckM Strain Heterogeneity 16.67
5S Count 3
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 65
N50 Contigs 181,298 bp
Longest Contig 593,702 bp
Scaffold Count 65
N50 Scaffolds 181,298 bp
Longest Scaffold 593,702 bp
Genome Size 4,685,804 bp
Protein Count 4,458
Coding Density 87.43%
GC Percentage 52.02%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM33000v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01041153
Country China:Jilin
Date 2012-12-31
Genbank Assembly Accession GCA_000330005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source chicken
Latitude Longitude None
Molecule Count N/A
CDS Count 4,757
Refseq Category na
Seq Rel Date 2012/12/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 984213
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALHC00000000.1