Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis; x__Salmonella enterica subsp. enterica serovar Enteritidis str. 629163
NCBI Strain Identifiers FDA00012111;629163
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 3
tRNA Count 19
Contig Count 65
N50 Contigs 283,481 bp
Longest Contig 593,563 bp
Scaffold Count 65
N50 Scaffolds 283,481 bp
Longest Scaffold 593,563 bp
Genome Size 4,724,696 bp
Protein Count 4,481
Coding Density 87.31%
GC Percentage 52.05%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32976v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01041115
Country USA
Date 2012-12-31
Genbank Assembly Accession GCA_000329765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source environmental swab
Latitude Longitude None
Molecule Count N/A
CDS Count 4,591
Refseq Category na
Seq Rel Date 2012/12/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 891414
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALGQ00000000.1