Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis; x__Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-19
NCBI Strain Identifiers 607308-19
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 60
N50 Contigs 306,215 bp
Longest Contig 629,322 bp
Scaffold Count 60
N50 Scaffolds 306,215 bp
Longest Scaffold 629,322 bp
Genome Size 4,727,640 bp
Protein Count 4,488
Coding Density 87.27%
GC Percentage 52.03%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32970v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01041111
Country USA:IA
Date 2012-12-31
Genbank Assembly Accession GCA_000329705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source environmental swab
Latitude Longitude None
Molecule Count N/A
CDS Count 4,803
Refseq Category na
Seq Rel Date 2012/12/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 887069
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALGN00000000.1