Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis; x__Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1455
NCBI Strain Identifiers CDC_2010K-1455;CDC_2010K_1455
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 44
N50 Contigs 261,625 bp
Longest Contig 729,043 bp
Scaffold Count 44
N50 Scaffolds 261,625 bp
Longest Scaffold 729,043 bp
Genome Size 4,695,551 bp
Protein Count 4,427
Coding Density 87.34%
GC Percentage 52.14%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32952v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01041172
Country None
Date 2012-12-31
Genbank Assembly Accession GCA_000329525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source clinical
Latitude Longitude None
Molecule Count N/A
CDS Count 4,542
Refseq Category na
Seq Rel Date 2012/12/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 3
Submitter FDA
Taxid 886724
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALGE00000000.1