Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis; x__Salmonella enterica subsp. enterica serovar Enteritidis str. 22704
NCBI Strain Identifiers 22704
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 1.69%
CheckM Strain Heterogeneity 9.52
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 429
N50 Contigs 20,581 bp
Longest Contig 76,185 bp
Scaffold Count 429
N50 Scaffolds 20,581 bp
Longest Scaffold 76,185 bp
Genome Size 4,666,768 bp
Protein Count 4,756
Coding Density 87.20%
GC Percentage 52.12%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32898v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01041089
Country USA:MD
Date 2012-12-31
Genbank Assembly Accession GCA_000328985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ground turkey
Latitude Longitude None
Molecule Count N/A
CDS Count 5,004
Refseq Category na
Seq Rel Date 2012/12/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 3
Submitter FDA
Taxid 702976
Total Gap Length 0
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALFD00000000.1