Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE145
NCBI Strain Identifiers KTE145
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 92
N50 Contigs 164,542 bp
Longest Contig 490,828 bp
Scaffold Count 92
N50 Scaffolds 164,542 bp
Longest Scaffold 490,828 bp
Genome Size 4,925,475 bp
Protein Count 4,590
Coding Density 88.20%
GC Percentage 50.51%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Esch_coli_KTE145_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00847708
Country None
Date 2012-12-19
Genbank Assembly Accession GCA_000326705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,977
Refseq Category na
Seq Rel Date 2012/12/19
Spanned Gaps 0
Species Taxid 562
SSU Count 1
Submitter Broad Institute
Taxid 1169390
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANYD00000000.1