Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli KTE160
NCBI Strain Identifiers KTE160
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 110
N50 Contigs 121,780 bp
Longest Contig 391,179 bp
Scaffold Count 110
N50 Scaffolds 121,780 bp
Longest Scaffold 391,179 bp
Genome Size 4,987,997 bp
Protein Count 4,647
Coding Density 87.93%
GC Percentage 50.41%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Esch_coli_KTE160_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00847713
Country None
Date 2012-12-19
Genbank Assembly Accession GCA_000326405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,079
Refseq Category na
Seq Rel Date 2012/12/19
Spanned Gaps 0
Species Taxid 562
SSU Count 1
Submitter Broad Institute
Taxid 1169395
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANYI00000000.1