Undefined name (Failed Quality Check)
Isolate HQ 11 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis; x__Yersinia pestis I2001001
NCBI Strain Identifiers I2001001
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.63%
CheckM Contamination 4.47%
CheckM Strain Heterogeneity 21.15
5S Count 0
16S Count 0
23S Count 0
tRNA Count 11
Contig Count 1,526
N50 Contigs 5,109 bp
Longest Contig 23,926 bp
Scaffold Count 1,526
N50 Scaffolds 5,109 bp
Longest Scaffold 23,926 bp
Genome Size 4,509,469 bp
Protein Count 4,900
Coding Density 84.42%
GC Percentage 47.46%
Ambiguous Bases N/A
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32508v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403088
Country None
Date 2012-12-07
Genbank Assembly Accession GCA_000325085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,983
Refseq Category na
Seq Rel Date 2012/12/07
Spanned Gaps 0
Species Taxid 632
SSU Count 0
Submitter Beijing Genomics Institute
Taxid 755916
Total Gap Length 0
Translation Table 11
tRNA Count (total) 16
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADSO00000000.1