Undefined name (Failed Quality Check)
Isolate HQ 16S/23S 12 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis; x__Yersinia pestis CMCC96007
NCBI Strain Identifiers CMCC96007
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.41%
CheckM Contamination 3.81%
CheckM Strain Heterogeneity 80.0
5S Count 0
16S Count 4
23S Count 5
tRNA Count 12
Contig Count 1,563
N50 Contigs 5,681 bp
Longest Contig 25,309 bp
Scaffold Count 1,563
N50 Scaffolds 5,681 bp
Longest Scaffold 25,309 bp
Genome Size 4,303,407 bp
Protein Count 4,560
Coding Density 85.44%
GC Percentage 48.15%
Ambiguous Bases N/A
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32458v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403064
Country None
Date 2012-12-07
Genbank Assembly Accession GCA_000324585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,615
Refseq Category na
Seq Rel Date 2012/12/07
Spanned Gaps 0
Species Taxid 632
SSU Count 4
Submitter Beijing Genomics Institute
Taxid 755951
Total Gap Length 0
Translation Table 11
tRNA Count (total) 18
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADRP00000000.1