Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia pestis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis; x__Yersinia pestis CMCC64001
NCBI Strain Identifiers CMCC64001
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460465.1)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.39%
CheckM Strain Heterogeneity 28.57
5S Count 0
16S Count 2
23S Count 2
tRNA Count 13
Contig Count 955
N50 Contigs 9,926 bp
Longest Contig 32,878 bp
Scaffold Count 955
N50 Scaffolds 9,926 bp
Longest Scaffold 32,878 bp
Genome Size 4,360,492 bp
Protein Count 4,233
Coding Density 84.34%
GC Percentage 47.72%
Ambiguous Bases N/A
GTDB representative GCA_900460465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32426v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403048
Country None
Date 2012-12-07
Genbank Assembly Accession GCA_000324265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,332
Refseq Category na
Seq Rel Date 2012/12/07
Spanned Gaps 0
Species Taxid 632
SSU Count 2
Submitter Beijing Genomics Institute
Taxid 755932
Total Gap Length 0
Translation Table 11
tRNA Count (total) 19
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADQZ00000000.1