Undefined name (Failed Quality Check)
Isolate HQ 12 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis; x__Yersinia pestis 620024
NCBI Strain Identifiers 620024
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 1.71%
CheckM Strain Heterogeneity 47.62
5S Count 0
16S Count 0
23S Count 0
tRNA Count 12
Contig Count 1,131
N50 Contigs 7,892 bp
Longest Contig 44,704 bp
Scaffold Count 1,131
N50 Scaffolds 7,892 bp
Longest Scaffold 44,704 bp
Genome Size 4,503,786 bp
Protein Count 4,515
Coding Density 84.40%
GC Percentage 47.61%
Ambiguous Bases N/A
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32348v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403008
Country None
Date 2012-12-07
Genbank Assembly Accession GCA_000323485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,573
Refseq Category na
Seq Rel Date 2012/12/07
Spanned Gaps 0
Species Taxid 632
SSU Count 0
Submitter Beijing Genomics Institute
Taxid 755881
Total Gap Length 0
Translation Table 11
tRNA Count (total) 21
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADPM00000000.1