Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium EnGen0036
NCBI Strain Identifiers E1731
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 5
16S Count 6
23S Count 5
tRNA Count 20
Contig Count 58
N50 Contigs 137,592 bp
Longest Contig 245,907 bp
Scaffold Count 23
N50 Scaffolds 456,622 bp
Longest Scaffold 1,332,701 bp
Genome Size 2,991,719 bp
Protein Count 2,823
Coding Density 83.78%
GC Percentage 37.87%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Ente_faec_E1731_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00779827
Country Tanzania
Date 2013-3-21
Genbank Assembly Accession GCA_000322065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Hospitalized patient; Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,986
Refseq Category na
Seq Rel Date 2013/03/21
Spanned Gaps 35
Species Taxid 1352
SSU Count 6
Submitter Broad Institute
Taxid 1138913
Total Gap Length 27875
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHXO00000000.1