Methanobrevibacter_B boviskoreani
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Methanobacteriota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobrevibacter_B; s__Methanobrevibacter_B boviskoreani
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobrevibacter; s__Methanobrevibacter boviskoreani
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Methanomada group; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobrevibacter; s__Methanobrevibacter boviskoreani; x__Methanobrevibacter boviskoreani JH1
NCBI Strain Identifiers JH1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 54
N50 Contigs 107,381 bp
Longest Contig 379,907 bp
Scaffold Count 54
N50 Scaffolds 107,381 bp
Longest Scaffold 379,907 bp
Genome Size 2,045,801 bp
Protein Count 1,759
Coding Density 78.00%
GC Percentage 28.98%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM32050v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036626
Country None
Date 2012-10-3
Genbank Assembly Accession GCA_000320505.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,741
Refseq Category representative genome
Seq Rel Date 2012/10/03
Spanned Gaps 0
Species Taxid 1348249
SSU Count 1
Submitter Korea Research Institute of Bioscience and Biotechnology
Taxid 1214066
Total Gap Length 0
Translation Table 11
tRNA Count (total) 34
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAGX00000000.2