Chlamydia trachomatis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia trachomatis
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia trachomatis
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia trachomatis; x__Chlamydia trachomatis D/SotonD6
NCBI Strain Identifiers D/SotonD6;SotonD6;D
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000012125.1)
Genome Characteristics
CheckM Completeness 98.92%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 6
N50 Contigs 841,238 bp
Longest Contig 841,238 bp
Scaffold Count 2
N50 Scaffolds 1,042,560 bp
Longest Scaffold 1,042,560 bp
Genome Size 1,050,053 bp
Protein Count 904
Coding Density 89.88%
GC Percentage 41.27%
Ambiguous Bases N/A
GTDB representative GCA_000012125.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM31862v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272565
Country None
Date 2012-3-13
Genbank Assembly Accession GCA_000318625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 928
Refseq Category na
Seq Rel Date 2012/03/13
Spanned Gaps 4
Species Taxid 813
SSU Count 2
Submitter Sanger Institute
Taxid 1071758
Total Gap Length 67
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None