Anabaena_A cylindrica
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Nostocaceae; g__Anabaena_A; s__Anabaena_A cylindrica
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Nostocales; f__Nostocaceae; g__Anabaena; s__Anabaena cylindrica
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Nostocales; f__Nostocaceae; g__Anabaena; s__Anabaena cylindrica; x__Anabaena cylindrica PCC 7122
NCBI Strain Identifiers PCC 7122
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 7
N50 Contigs 6,395,836 bp
Longest Contig 6,395,836 bp
Scaffold Count 7
N50 Scaffolds 6,395,836 bp
Longest Scaffold 6,395,836 bp
Genome Size 7,063,285 bp
Protein Count 6,197
Coding Density 81.97%
GC Percentage 38.79%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM31769v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232008
Country United Kingdom
Date 2012-12-7
Genbank Assembly Accession GCA_000317695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water; most likely pond
Latitude Longitude 52.202 N 0.131 E
Molecule Count 7
CDS Count 6,122
Refseq Category representative genome
Seq Rel Date 2012/12/07
Spanned Gaps 0
Species Taxid 1165
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 272123
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None