Halothece sp000317635
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Rubidibacteraceae; g__Halothece; s__Halothece sp000317635
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Chroococcales; f__Aphanothecaceae; g__Halothece; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; x__Oscillatoriophycideae; o__Chroococcales; f__Aphanothecaceae; x__Halothece cluster; g__Halothece; s__Halothece sp. PCC 7418
NCBI Strain Identifiers PCC 7418
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 4,179,170 bp
Longest Contig 4,179,170 bp
Scaffold Count 1
N50 Scaffolds 4,179,170 bp
Longest Scaffold 4,179,170 bp
Genome Size 4,179,170 bp
Protein Count 3,848
Coding Density 86.51%
GC Percentage 42.92%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM31763v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232029
Country Israel: Solar lake
Date 2012-12-7
Genbank Assembly Accession GCA_000317635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Water; lake; Solar lake
Latitude Longitude None
Molecule Count 1
CDS Count 3,819
Refseq Category na
Seq Rel Date 2012/12/07
Spanned Gaps 0
Species Taxid 65093
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 65093
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None