Chlorogloeopsis fritschii
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Nostocaceae; g__Chlorogloeopsis; s__Chlorogloeopsis fritschii
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Nostocales; f__Chlorogloeopsidaceae; g__Chlorogloeopsis; s__Chlorogloeopsis fritschii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Nostocales; f__Chlorogloeopsidaceae; g__Chlorogloeopsis; s__Chlorogloeopsis fritschii; x__Chlorogloeopsis fritschii PCC 9212
NCBI Strain Identifiers PCC 9212
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000317285.1)
Genome Characteristics
CheckM Completeness 99.76%
CheckM Contamination 1.53%
CheckM Strain Heterogeneity 12.5
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 188
N50 Contigs 117,952 bp
Longest Contig 499,684 bp
Scaffold Count 188
N50 Scaffolds 117,952 bp
Longest Scaffold 499,684 bp
Genome Size 7,649,851 bp
Protein Count 6,722
Coding Density 80.87%
GC Percentage 41.50%
Ambiguous Bases N/A
GTDB representative GCA_000317285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ChlPCC9212_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469882
Country Spain: Orense
Date 2012-12-05
Genbank Assembly Accession GCA_000317265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water; thermal spring
Latitude Longitude None
Molecule Count N/A
CDS Count 6,655
Refseq Category na
Seq Rel Date 2012/12/05
Spanned Gaps 0
Species Taxid 1124
SSU Count 1
Submitter Heinrich-Heine-University Duesseldorf
Taxid 184925
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJLM00000000.1