Staphylococcus pasteuri_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus pasteuri_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus sp. E463
NCBI Strain Identifiers E463
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002442915.1)
Genome Characteristics
CheckM Completeness 98.76%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 118
N50 Contigs 55,589 bp
Longest Contig 158,293 bp
Scaffold Count 118
N50 Scaffolds 55,589 bp
Longest Scaffold 158,293 bp
Genome Size 2,486,777 bp
Protein Count 2,460
Coding Density 86.29%
GC Percentage 31.55%
Ambiguous Bases 1
GTDB representative GCA_002442915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name E463
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470874
Country USA:CA; La Jolla
Date 2012-12-04
Genbank Assembly Accession GCA_000316945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source kelp holobiont
Latitude Longitude None
Molecule Count N/A
CDS Count 2,393
Refseq Category na
Seq Rel Date 2012/12/04
Spanned Gaps 0
Species Taxid 1234593
SSU Count 3
Submitter San Diego State University
Taxid 1234593
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material assembly from proxytype material
Unspanned Gaps 0
Version Status latest
WGS Master ANBY00000000.1