Rivularia sp000316665
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Nostocaceae; g__Rivularia; s__Rivularia sp000316665
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Nostocales; f__Rivulariaceae; g__Rivularia; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Nostocales; f__Rivulariaceae; g__Rivularia; s__Rivularia sp. PCC 7116
NCBI Strain Identifiers PCC 7116
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.78%
CheckM Contamination 1.22%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 3
N50 Contigs 8,698,463 bp
Longest Contig 8,698,463 bp
Scaffold Count 3
N50 Scaffolds 8,698,463 bp
Longest Scaffold 8,698,463 bp
Genome Size 8,728,773 bp
Protein Count 6,848
Coding Density 79.27%
GC Percentage 37.53%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM31666v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232049
Country USA
Date 2012-12-4
Genbank Assembly Accession GCA_000316665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source unialgal culture in marine water
Latitude Longitude None
Molecule Count 3
CDS Count 6,728
Refseq Category na
Seq Rel Date 2012/12/04
Spanned Gaps 0
Species Taxid 373994
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 373994
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None