Trichormus sp000316645
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Nostocaceae; g__Trichormus; s__Trichormus sp000316645
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Nostocales; f__Nostocaceae; g__Nostoc; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Nostocales; f__Nostocaceae; g__Nostoc; s__Nostoc sp. PCC 7524
NCBI Strain Identifiers PCC 7524
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 3
N50 Contigs 6,635,030 bp
Longest Contig 6,635,030 bp
Scaffold Count 3
N50 Scaffolds 6,635,030 bp
Longest Scaffold 6,635,030 bp
Genome Size 6,718,869 bp
Protein Count 5,586
Coding Density 82.57%
GC Percentage 41.53%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM31664v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261333
Country Sri Lanka: Amparai District; Maha Oya
Date 2012-12-4
Genbank Assembly Accession GCA_000316645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source moderate hot spring
Latitude Longitude 7.528 N 81.357 E
Molecule Count 3
CDS Count 5,578
Refseq Category na
Seq Rel Date 2012/12/04
Spanned Gaps 0
Species Taxid 28072
SSU Count 5
Submitter JGI
Taxid 28072
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None