Aeromonas salmonicida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. achromogenes; x__Aeromonas salmonicida subsp. achromogenes AS03
NCBI Strain Identifiers AS03
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.45%
CheckM Strain Heterogeneity 100.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 19
Contig Count 69
N50 Contigs 124,543 bp
Longest Contig 247,214 bp
Scaffold Count 69
N50 Scaffolds 124,543 bp
Longest Scaffold 247,214 bp
Genome Size 4,958,383 bp
Protein Count 5,094
Coding Density 85.59%
GC Percentage 58.33%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM31585v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470909
Country South Korea
Date 2013-8-13
Genbank Assembly Accession GCA_000315855.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,936
Refseq Category na
Seq Rel Date 2013/08/13
Spanned Gaps 0
Species Taxid 645
SSU Count 7
Submitter Seoul National University
Taxid 1233098
Total Gap Length 0
Translation Table 11
tRNA Count (total) 110
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMQG00000000.2