Campylobacter_D jejuni
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; sb__Campylobacter jejuni subsp. jejuni; x__Campylobacter jejuni subsp. jejuni BIGS0022
NCBI Strain Identifiers BIGS0022
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 97.67%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 169
N50 Contigs 15,816 bp
Longest Contig 46,541 bp
Scaffold Count 169
N50 Scaffolds 15,816 bp
Longest Scaffold 46,541 bp
Genome Size 1,573,736 bp
Protein Count 1,736
Coding Density 94.15%
GC Percentage 30.85%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM31444v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01795906
Country United Kingdom
Date 2012-11-23
Genbank Assembly Accession GCA_000314445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source chicken offal or meat
Latitude Longitude None
Molecule Count N/A
CDS Count 1,702
Refseq Category na
Seq Rel Date 2012/11/23
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter Swansea University
Taxid 1248402
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANHG00000000.1