Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli; x__Campylobacter coli BIGS0005
NCBI Strain Identifiers BIGS0005
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 97.59%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 255
N50 Contigs 10,463 bp
Longest Contig 51,401 bp
Scaffold Count 255
N50 Scaffolds 10,463 bp
Longest Scaffold 51,401 bp
Genome Size 1,589,408 bp
Protein Count 1,744
Coding Density 93.81%
GC Percentage 31.82%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM31410v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01795761
Country United Kingdom
Date 2012-11-23
Genbank Assembly Accession GCA_000314105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Pig
Latitude Longitude None
Molecule Count N/A
CDS Count 1,715
Refseq Category na
Seq Rel Date 2012/11/23
Spanned Gaps 0
Species Taxid 195
SSU Count 1
Submitter Swansea University
Taxid 1247730
Total Gap Length 0
Translation Table 11
tRNA Count (total) 30
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANGP00000000.1