Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Proteus; s__Proteus mirabilis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis; x__Proteus mirabilis C05028
NCBI Strain Identifiers C05028
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160755.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 6
tRNA Count 19
Contig Count 85
N50 Contigs 168,941 bp
Longest Contig 317,538 bp
Scaffold Count 39
N50 Scaffolds 620,676 bp
Longest Scaffold 1,385,144 bp
Genome Size 3,817,619 bp
Protein Count 3,391
Coding Density 84.37%
GC Percentage 38.52%
Ambiguous Bases N/A
GTDB representative GCA_000160755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Version 1 for Proteus mirabilis C05028 genome
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470975
Country China: Shenzhen; Guangdong
Date 2013-01-02
Genbank Assembly Accession GCA_000313255.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool from a patient with diarrhea due to a foodborne disease outbreak
Latitude Longitude None
Molecule Count N/A
CDS Count 3,438
Refseq Category na
Seq Rel Date 2013/01/02
Spanned Gaps 46
Species Taxid 584
SSU Count 1
Submitter BGI-shenzhen
Taxid 1245027
Total Gap Length 24529
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANBT00000000.1