Yersinia massiliensis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia massiliensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia massiliensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia massiliensis; x__Yersinia massiliensis CCUG 53443
NCBI Strain Identifiers CCUG 53443
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (13 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.76%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 60
N50 Contigs 191,225 bp
Longest Contig 952,156 bp
Scaffold Count 22
N50 Scaffolds 792,866 bp
Longest Scaffold 1,955,540 bp
Genome Size 5,050,276 bp
Protein Count 4,562
Coding Density 85.02%
GC Percentage 47.29%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM31248v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272758
Country None
Date 2012-10-3
Genbank Assembly Accession GCA_000312485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,574
Refseq Category na
Seq Rel Date 2012/10/03
Spanned Gaps 38
Species Taxid 419257
SSU Count 1
Submitter ebi
Taxid 1205683
Total Gap Length 22163
Translation Table 11
tRNA Count (total) 65
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CAKR00000000.1