Microcystis panniformis_A
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Microcystaceae; g__Microcystis; s__Microcystis panniformis_A
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Chroococcales; f__Microcystaceae; g__Microcystis; s__Microcystis aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; x__Oscillatoriophycideae; o__Chroococcales; f__Microcystaceae; g__Microcystis; s__Microcystis aeruginosa; x__Microcystis aeruginosa PCC 9807
NCBI Strain Identifiers PCC 9807
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001264245.1)
Genome Characteristics
CheckM Completeness 99.01%
CheckM Contamination 0.91%
CheckM Strain Heterogeneity 14.29
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 782
N50 Contigs 11,789 bp
Longest Contig 85,874 bp
Scaffold Count 267
N50 Scaffolds 252,099 bp
Longest Scaffold 822,678 bp
Genome Size 5,155,707 bp
Protein Count 4,878
Coding Density 77.90%
GC Percentage 42.66%
Ambiguous Bases 9
GTDB representative GCA_001264245.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM31222v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272564
Country None
Date 2012-8-6
Genbank Assembly Accession GCA_000312225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,193
Refseq Category na
Seq Rel Date 2012/08/06
Spanned Gaps 781
Species Taxid 1126
SSU Count 1
Submitter Genoscope CEA
Taxid 1160283
Total Gap Length 78100
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAIM00000000.1