Microcystis panniformis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Cyanobacteriales; f__Microcystaceae; g__Microcystis; s__Microcystis panniformis
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Chroococcales; f__Microcystaceae; g__Microcystis; s__Microcystis aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; x__Oscillatoriophycideae; o__Chroococcales; f__Microcystaceae; g__Microcystis; s__Microcystis aeruginosa; x__Microcystis aeruginosa PCC 7941
NCBI Strain Identifiers 7941
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002095975.1)
Genome Characteristics
CheckM Completeness 98.57%
CheckM Contamination 0.73%
CheckM Strain Heterogeneity 25.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 433
N50 Contigs 19,888 bp
Longest Contig 82,265 bp
Scaffold Count 77
N50 Scaffolds 287,240 bp
Longest Scaffold 498,496 bp
Genome Size 4,801,899 bp
Protein Count 4,477
Coding Density 79.91%
GC Percentage 42.63%
Ambiguous Bases 20
GTDB representative GCA_002095975.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM31220v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272182
Country None
Date 2012-8-6
Genbank Assembly Accession GCA_000312205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,733
Refseq Category na
Seq Rel Date 2012/08/06
Spanned Gaps 432
Species Taxid 1126
SSU Count 1
Submitter Genoscope CEA
Taxid 213618
Total Gap Length 43200
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAIK00000000.1