Streptococcus agalactiae
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae; x__Streptococcus agalactiae MRI Z1-023
NCBI Strain Identifiers MRI Z1-023
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.24%
CheckM Strain Heterogeneity 33.33
5S Count 2
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 23
N50 Contigs 215,636 bp
Longest Contig 604,776 bp
Scaffold Count 23
N50 Scaffolds 215,636 bp
Longest Scaffold 604,776 bp
Genome Size 2,097,920 bp
Protein Count 2,081
Coding Density 89.44%
GC Percentage 35.46%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM31142v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00993342
Country None
Date 2012-11-07
Genbank Assembly Accession GCA_000311425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,141
Refseq Category na
Seq Rel Date 2012/11/07
Spanned Gaps 0
Species Taxid 1311
SSU Count 5
Submitter The J. Craig Venter Institute
Taxid 1154865
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ANEN00000000.1