Occidentia massiliensis
Isolate MQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Occidentia; s__Occidentia massiliensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Occidentia; s__Occidentia massiliensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Occidentia; s__Occidentia massiliensis
NCBI Strain Identifiers Os18
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 97.0%
CheckM Contamination 9.23%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 301
N50 Contigs 50,049 bp
Longest Contig 191,680 bp
Scaffold Count 301
N50 Scaffolds 50,049 bp
Longest Scaffold 191,680 bp
Genome Size 1,469,252 bp
Protein Count 1,504
Coding Density 82.98%
GC Percentage 29.05%
Ambiguous Bases 5
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM30907v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272772
Country None
Date 2012-10-02
Genbank Assembly Accession GCA_000309075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,366
Refseq Category representative genome
Seq Rel Date 2012/10/02
Spanned Gaps 0
Species Taxid 752179
SSU Count 1
Submitter ebi
Taxid 752179
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CANJ00000000.1