Nocardia takedensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Nocardia; s__Nocardia takedensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Nocardia; s__Nocardia takedensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Nocardia; s__Nocardia takedensis; x__Nocardia takedensis NBRC 100417
NCBI Strain Identifiers NBRC 100417
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 3.41%
CheckM Strain Heterogeneity 4.35
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 266
N50 Contigs 96,425 bp
Longest Contig 379,680 bp
Scaffold Count 266
N50 Scaffolds 96,425 bp
Longest Scaffold 379,680 bp
Genome Size 8,033,873 bp
Protein Count 7,320
Coding Density 88.60%
GC Percentage 69.54%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM30869v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00041777
Country None
Date 2012-07-16
Genbank Assembly Accession GCA_000308695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,151
Refseq Category representative genome
Seq Rel Date 2012/07/16
Spanned Gaps 0
Species Taxid 259390
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1206735
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAGG00000000.1