Nocardia brevicatena
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Nocardia; s__Nocardia brevicatena
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Nocardia; s__Nocardia brevicatena
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Nocardia; s__Nocardia brevicatena; x__Nocardia brevicatena NBRC 12119
NCBI Strain Identifiers NBRC 12119
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 2.71%
CheckM Strain Heterogeneity 18.18
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 248
N50 Contigs 102,039 bp
Longest Contig 355,014 bp
Scaffold Count 248
N50 Scaffolds 102,039 bp
Longest Scaffold 355,014 bp
Genome Size 7,007,170 bp
Protein Count 6,846
Coding Density 85.20%
GC Percentage 66.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM30849v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00041812
Country None
Date 2012-07-13
Genbank Assembly Accession GCA_000308495.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,603
Refseq Category representative genome
Seq Rel Date 2012/07/13
Spanned Gaps 0
Species Taxid 37327
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1206725
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAFU00000000.1