Stenotrophomonas bentonitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia; x__Stenotrophomonas maltophilia PML168
NCBI Strain Identifiers PML168
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.91%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 97
N50 Contigs 108,352 bp
Longest Contig 292,902 bp
Scaffold Count 97
N50 Scaffolds 108,353 bp
Longest Scaffold 292,903 bp
Genome Size 4,403,876 bp
Protein Count 3,986
Coding Density 89.82%
GC Percentage 66.57%
Ambiguous Bases 0
GTDB representative GCF_002887735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM30833v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272452
Country United Kingdom:Devon; Wembury Beach
Date 2012-6-6
Genbank Assembly Accession GCA_000308335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rock pool
Latitude Longitude 50.18 N 4.05 W
Molecule Count 0
Protein Count 3,977
Refseq Category na
Seq Rel Date 2012/06/06
Spanned Gaps 0
Species Taxid 40324
SSU Count 2
Submitter PMLA
Taxid 1118235
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAJH00000000.1