Pseudomonas_A stutzeri_B
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_A; s__Pseudomonas_A stutzeri_B
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas stutzeri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas stutzeri group; x__Pseudomonas stutzeri subgroup; s__Pseudomonas stutzeri; x__Pseudomonas stutzeri KOS6
NCBI Strain Identifiers KOS6
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 91
N50 Contigs 130,512 bp
Longest Contig 400,491 bp
Scaffold Count 5
N50 Scaffolds 2,709,949 bp
Longest Scaffold 2,709,949 bp
Genome Size 4,947,214 bp
Protein Count 4,519
Coding Density 86.53%
GC Percentage 62.95%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name PseStu2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470828
Country Russia: Kazan; Republic of Tatarstan
Date 2014-2-11
Genbank Assembly Accession GCA_000307775.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source chemical hydrocarbon sludge (waste waters from petrol industry factory)
Latitude Longitude None
Molecule Count N/A
CDS Count 4,512
Refseq Category na
Seq Rel Date 2014/02/11
Spanned Gaps 86
Species Taxid 316
SSU Count 1
Submitter RIPCM
Taxid 1218352
Total Gap Length 91333
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMCZ00000000.2