Streptococcus intermedius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus intermedius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus intermedius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; x__Streptococcus anginosus group; s__Streptococcus intermedius; x__Streptococcus intermedius JTH08
NCBI Strain Identifiers JTH08
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000413475.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 1,933,610 bp
Longest Contig 1,933,610 bp
Scaffold Count 1
N50 Scaffolds 1,933,610 bp
Longest Scaffold 1,933,610 bp
Genome Size 1,933,610 bp
Protein Count 1,841
Coding Density 87.34%
GC Percentage 37.71%
Ambiguous Bases N/A
GTDB representative GCA_000413475.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM30680v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00060960
Country None
Date 2012-6-16
Genbank Assembly Accession GCA_000306805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,844
Refseq Category na
Seq Rel Date 2012/06/16
Spanned Gaps 0
Species Taxid 1338
SSU Count 4
Submitter Juntendo University School of Medicine
Taxid 591365
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None