Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio owensii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio sp. HENC-03
NCBI Strain Identifiers HENC-03
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000817815.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 125
N50 Contigs 187,950 bp
Longest Contig 993,152 bp
Scaffold Count 87
N50 Scaffolds 334,653 bp
Longest Scaffold 1,048,351 bp
Genome Size 5,907,191 bp
Protein Count 5,249
Coding Density 87.20%
GC Percentage 45.55%
Ambiguous Bases N/A
GTDB representative GCA_000817815.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM30575v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00752549
Country Haiti
Date 2012-10-16
Genbank Assembly Accession GCA_000305755.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source environmental
Latitude Longitude None
Molecule Count N/A
CDS Count 5,269
Refseq Category na
Seq Rel Date 2012/10/16
Spanned Gaps 38
Species Taxid 992012
SSU Count 3
Submitter Institute for Genome Sciences
Taxid 992012
Total Gap Length 1732
Translation Table 11
tRNA Count (total) 91
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJSS00000000.1