Microbacterium yannicii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium yannicii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium yannicii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium yannicii; x__Microbacterium yannicii PS01
NCBI Strain Identifiers PS01
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.57%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 67
N50 Contigs 99,505 bp
Longest Contig 251,271 bp
Scaffold Count 67
N50 Scaffolds 99,505 bp
Longest Scaffold 251,271 bp
Genome Size 3,952,501 bp
Protein Count 3,693
Coding Density 91.68%
GC Percentage 69.54%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name My_PS01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138423
Country None
Date 2012-06-21
Genbank Assembly Accession GCA_000304335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,635
Refseq Category representative genome
Seq Rel Date 2012/06/21
Spanned Gaps 0
Species Taxid 671622
SSU Count 1
Submitter URMITE
Taxid 1194165
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAJF00000000.1